Insertion junction: LMJ.RY0402.153568_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.153568
Chromosome:chromosome 3
Location:5374043
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g184500 (1 of 2) PTHR33925:SF3 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCCATACCACCCCTCTGCTACAGCCCG
Internal bar code:GGGAAGCTAATATCGAGAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:742
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:405
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CATAAGGACGTGGCGTAGGT
Suggested primer 2:GACTGGTCTGAAGCGTGTGA