Insertion junction: LMJ.RY0402.153728_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.153728
Chromosome:chromosome 12
Location:1085259
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g490800 (1 of 6) IPR000104//IPR000719//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACACGGCATGTTGCTTGGGTGCATGGG
Internal bar code:GGGAACACGGGCGTCCTTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:658
LEAP-Seq percent confirming:99.75
LEAP-Seq n confirming:1995
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCAGGAACAAAGACGTT
Suggested primer 2:AGCTGATGGACACGTCACTG