Insertion junction: LMJ.RY0402.153841_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.153841
Chromosome:chromosome 13
Location:1369835
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g571700 CDPK9 (1 of 1) PF00069//PF07714//PF13499 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) // EF-hand domain pair (EF-hand_7); Calcium/calmodulin-dependent protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCTTGGTGAGCACTTGAGGCACGTGCT
Internal bar code:GTCCTGCTCTCGAGTAAGATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:604
LEAP-Seq percent confirming:99.8477
LEAP-Seq n confirming:1311
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCTTTGCTGCAGCTTTA
Suggested primer 2:GACACTCTGTCCTTCCGCTC