Insertion junction: LMJ.RY0402.153998_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.153998
Chromosome:chromosome 12
Location:1822792
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g511950 (1 of 1) IPR003591//IPR013210 - Leucine-rich repeat, typical subtype // Leucine-rich repeat-containing N-terminal, plant-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCGGGATAGAAGCACGGCAAGGCAAAA
Internal bar code:CAGGCGTTTGCGGCGTGGACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:714
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCTGTCAGCATTCGATA
Suggested primer 2:TGAGTGCACCGGTATGGTAA