Insertion junction: LMJ.RY0402.154100_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.154100
Chromosome:chromosome 1
Location:3363868
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g021300 (1 of 2) IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGTTTCGGTGGGGTGGGCGGAGCGCTG
Internal bar code:AAAACGTGTTTCTTCCGCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:833
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTGTGAGTGGTTGTGAG
Suggested primer 2:GCCTAGGGAACTTGGAAAGG