Insertion junction: LMJ.RY0402.154156_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.154156
Chromosome:chromosome 3
Location:8419779
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g199199 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTATCTAAGAGGTGGCGCAGGCGTGGCT
Internal bar code:TCCACACCTCATGGCGAAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:273
LEAP-Seq percent confirming:60.1263
LEAP-Seq n confirming:1143
LEAP-Seq n nonconfirming:758
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTTCGTACAGGCACAGC
Suggested primer 2:CCACCACATCAGACACAAGG