Insertion junction: LMJ.RY0402.154396_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.154396
Chromosome:chromosome 9
Location:2866616
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g388500 (1 of 13) PF09273 - Rubisco LSMT substrate-binding (Rubis-subs-bind) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGGGCCTCGGGCTGGTCCGTTACGGAC
Internal bar code:CGCGCGTTCAAGACTAGCGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:826
LEAP-Seq percent confirming:88.5616
LEAP-Seq n confirming:2826
LEAP-Seq n nonconfirming:365
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGCAGGTGTTCTCCTC
Suggested primer 2:GGTTGCCATGTACAGTCGTG