Insertion junction: LMJ.RY0402.154396_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.154396
Chromosome:chromosome 9
Location:2866623
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g388500 (1 of 13) PF09273 - Rubisco LSMT substrate-binding (Rubis-subs-bind) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCCGACTCACTCCCTTAACGGTTCTCA
Internal bar code:CTCTTTCTGACCTGGCCGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:243
LEAP-Seq percent confirming:99.7333
LEAP-Seq n confirming:2992
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGCAGGTGTTCTCCTC
Suggested primer 2:GGTTGCCATGTACAGTCGTG