Insertion junction: LMJ.RY0402.154416_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.154416
Chromosome:chromosome 5
Location:1964505
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g241638 (1 of 1) IPR000253//IPR002562//IPR012337 - Forkhead-associated (FHA) domain // 3'-5' exonuclease domain // Ribonuclease H-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACCAGGGCTTTAACACCCATTGTCAAG
Internal bar code:AGAGTCCAAGGCCACAAGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:698
LEAP-Seq percent confirming:92.0168
LEAP-Seq n confirming:7031
LEAP-Seq n nonconfirming:610
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGCATCAAACACAAAACA
Suggested primer 2:TCAGTGGATCCTCTTGGGAC