Insertion junction: LMJ.RY0402.154478_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.154478
Chromosome:chromosome 12
Location:5955356
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g534550 PHR4 (1 of 1) PTHR11455:SF2 - BLUE-LIGHT PHOTORECEPTOR PHR2; Putative photolyase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTATATGGTACAATGCAGTCAAAGCTGC
Internal bar code:GGATTGCGATGAACCGGTCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:641
LEAP-Seq percent confirming:39.7582
LEAP-Seq n confirming:10227
LEAP-Seq n nonconfirming:15496
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:CATATAGGTGCTGATGGGGG
Suggested primer 2:CCCCAGTTGTCACCTTGAGT