Insertion junction: LMJ.RY0402.154494_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.154494
Chromosome:chromosome 11
Location:2138468
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g469500 FXL6 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGGAATTCAGCCACCGACCTTTTTGAA
Internal bar code:CCGCAAAAAGGGTCCGACGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:699
LEAP-Seq percent confirming:84.2064
LEAP-Seq n confirming:1061
LEAP-Seq n nonconfirming:199
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTCACGCAAACCAATCA
Suggested primer 2:CAGCAATGCTTGAGTGAGGA