Insertion junction: LMJ.RY0402.154555_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.154555
Chromosome:chromosome 6
Location:3903585
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g278181 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTAGCGTGTGTGTACAAGCGTGACGCT
Internal bar code:GTGTGGCCCAGTCCAGGGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:8
LEAP-Seq percent confirming:99.8325
LEAP-Seq n confirming:596
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTGATTTGCCTCTGTCC
Suggested primer 2:AGCGCAATTCGGTCTAAGAA