Insertion junction: LMJ.RY0402.154799_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.154799
Chromosome:chromosome 12
Location:9220233
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre12.g541750 ZPD1 (1 of 1) 1.3.99.30 - Phytoene desaturase (3,4-didehydrolycopene-forming) / 5-step phytoene desaturase; Putative zeta-phytoene desaturase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCACCGCCGCCTGCCAGGGACGTGCCGC
Internal bar code:TGTGGCCCGCGGCTTGGCCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:264
LEAP-Seq percent confirming:91.2032
LEAP-Seq n confirming:902
LEAP-Seq n nonconfirming:87
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTGCCAACACCCTTTTC
Suggested primer 2:GGACATCACTCTCGAGCACA