Insertion junction: LMJ.RY0402.155028_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.155028
Chromosome:chromosome 1
Location:5555305
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g039450 (1 of 2) PTHR34548//PTHR34548:SF2 - FAMILY NOT NAMED // PROTEIN TIC 21, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGAAAGTACAGCAGTACGGCATGTAGT
Internal bar code:ACAAAGACGGGGTAGACGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:979
LEAP-Seq percent confirming:99.6822
LEAP-Seq n confirming:941
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGGAGCACTATTTGGAC
Suggested primer 2:CCCGAAGAAGGACTTGACTG