Insertion junction: LMJ.RY0402.156171_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.156171
Chromosome:scaffold 19
Location:72924
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre19.g750547 NDA2 thylakoid NADH dehydrogenase; (1 of 3) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGATGAGGATCGGTTGAGCGATGGTCG
Internal bar code:CCCAGATTGGATGCGAGGGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:30
LEAP-Seq percent confirming:88.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTGTTCCCTCCTCCTTC
Suggested primer 2:TCTACCCCAACCTGGTCAAG