Insertion junction: LMJ.RY0402.156254_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.156254
Chromosome:chromosome 13
Location:4535983
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g602750 (1 of 5) PTHR32467:SF15 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTGCCCGTCCACACGCTGCTGCCGATC
Internal bar code:GATCGGCGTTGGGCCTCGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:129
LEAP-Seq percent confirming:54.2926
LEAP-Seq n confirming:449
LEAP-Seq n nonconfirming:378
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTGCTGTTGAGAGACTG
Suggested primer 2:GCAATTTCCTGGAGACTCGT