Insertion junction: LMJ.RY0402.156312_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.156312
Chromosome:chromosome 2
Location:5168489
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre02.g105450 CGL141 (1 of 1) PTHR36749:SF1 - F7O18.3 PROTEIN; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGGCGGGCCGGCAGCACCGAGAGCTGT
Internal bar code:TTTCTGTTATTTTTCGTGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:17
LEAP-Seq percent confirming:65.6471
LEAP-Seq n confirming:837
LEAP-Seq n nonconfirming:438
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACGCACAACATACCGAT
Suggested primer 2:TACGAGTGTGGCATGTGGAT