Insertion junction: LMJ.RY0402.156329_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.156329
Chromosome:chromosome 14
Location:2382875
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g624201 (1 of 1) PTHR10438//PTHR10438:SF247 - THIOREDOXIN // THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCAATCCGAGCGGGTGTGCGAGACCGGC
Internal bar code:CGCGAGGTACGCCGTCCAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1021
LEAP-Seq percent confirming:96.3069
LEAP-Seq n confirming:4042
LEAP-Seq n nonconfirming:155
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGACACGGAGGAGGAGT
Suggested primer 2:CTAAACCTCCTCCGGTCCTC