Insertion junction: LMJ.RY0402.156539_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.156539
Chromosome:chromosome 17
Location:3261862
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g722900 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATTCCGTCAGTTGCAAGGCCTGCAACTC
Internal bar code:AACTGTGCGTAATTGCGCTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1053
LEAP-Seq percent confirming:85.5882
LEAP-Seq n confirming:3587
LEAP-Seq n nonconfirming:604
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCTATGCCTAACAACGC
Suggested primer 2:TTAGGAATGGTCTTTGCGCT