Insertion junction: LMJ.RY0402.156585_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.156585
Chromosome:chromosome 6
Location:1065281
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g256500 (1 of 2) PTHR14187//PTHR14187:SF5 - ALPHA KINASE/ELONGATION FACTOR 2 KINASE // SUBFAMILY NOT NAMED CDS|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCTGCGACTGCGGCCGCCTCCCGCGGAC
Internal bar code:CGCGATGACCGGCTGCTAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:582
LEAP-Seq percent confirming:99.5498
LEAP-Seq n confirming:1769
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCCGAAGATTCAGATGG
Suggested primer 2:AACGGTTGAGGAGTTGGTTG