Insertion junction: LMJ.RY0402.156658_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.156658
Chromosome:chromosome 11
Location:3693440
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g482700 (1 of 3) PF09011 - HMG-box domain (HMG_box_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCCGCATGAGGACTAGAGAGGCCGTCG
Internal bar code:CCCTCGGCTGCAGTGCGATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:831
LEAP-Seq percent confirming:87.2832
LEAP-Seq n confirming:1359
LEAP-Seq n nonconfirming:198
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCATGTCATGTTGGTGCT
Suggested primer 2:ATAGGCACCCTGCACAAAAC