Insertion junction: LMJ.RY0402.156768_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.156768
Chromosome:chromosome 3
Location:8850710
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g206817 (1 of 2) IPR001739//IPR016177 - Methyl-CpG DNA binding // DNA-binding domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGGACGGCGGTTGGAGACACAGCGCC
Internal bar code:GGGTCAAGGGCACGGACATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:16.6934
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:519
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTAAACCAAAGCCACCCA
Suggested primer 2:CCTTGCAACAGGCATAAGGT