Insertion junction: LMJ.RY0402.156864_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.156864
Chromosome:scaffold 36
Location:22561
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre36.g759697 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGAGCAACCCGTTGAAGCAGTGAATCA
Internal bar code:GCAAGGAATCGGGCAGGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:383
LEAP-Seq percent confirming:94.578
LEAP-Seq n confirming:4169
LEAP-Seq n nonconfirming:239
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCAATTGGTGCCTGCAA
Suggested primer 2:GCTGCTCATACGCTACACCA