Insertion junction: LMJ.RY0402.156878_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.156878
Chromosome:chromosome 1
Location:5719821
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g040801 (1 of 3) PTHR18937//PTHR18937:SF254 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATCGCGCGACGGGCCGTCTTCGTACGC
Internal bar code:GCGCGGTTGGCCCCTGGCTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1142
LEAP-Seq percent confirming:99.4112
LEAP-Seq n confirming:5572
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TATCAAACCTCAACCTGCCC
Suggested primer 2:TTGAGGCATGCGTTAGAGTG