Insertion junction: LMJ.RY0402.156931_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.156931
Chromosome:chromosome 8
Location:3537986
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g375400 GSM1 (1 of 1) PTHR11850//PTHR11850:SF102 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED; Gamete-specific minus 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCTCCACACCCATCATGTTTTTCATGG
Internal bar code:GGGCACCGGAAAGGAATGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:598
LEAP-Seq percent confirming:99.5354
LEAP-Seq n confirming:857
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GATCAGAACGACGAGTGCAA
Suggested primer 2:TAACTCCCCCACACTTACGG