Insertion junction: LMJ.RY0402.157102_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.157102
Chromosome:chromosome 13
Location:2507143
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g580300 CGLD4,ABC3 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR12847//PTHR12847:SF6 - ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED // ABC TRANSPORTER I FAMILY MEMBER 19-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATAAGAAACCGGAGGCACGAGGACGCGG
Internal bar code:TCCGGTCTTCTGCCTACGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:493
LEAP-Seq percent confirming:99.7598
LEAP-Seq n confirming:1246
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGCTCAAGCCCTACGAC
Suggested primer 2:ATGCACTTCTCTCGATGCCT