Insertion junction: LMJ.RY0402.157152_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.157152
Chromosome:chromosome 3
Location:6648077
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g197050 HTV2 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAGACGGGACGTCTGGGGCCCAAGTCT
Internal bar code:TGACCCGTCCATCACCGTTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:99.224
LEAP-Seq n confirming:10485
LEAP-Seq n nonconfirming:82
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGGTTGCACTGGCTAGG
Suggested primer 2:CGGACCATAAGAAAGGACCA