Insertion junction: LMJ.RY0402.157312_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.157312
Chromosome:chromosome 6
Location:3901931
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g278181 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCGCCACCACGCGCACCAAGCGCTGCAT
Internal bar code:TAGATCTAAATTATCTGCGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:80
LEAP-Seq percent confirming:99.7024
LEAP-Seq n confirming:335
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCTCAGTAGTCGGGTGA
Suggested primer 2:GTGAGGATGAGAACATGGGG