Insertion junction: LMJ.RY0402.157435_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.157435
Chromosome:chromosome 5
Location:2559911
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g236050 (1 of 2) IPR015097 - Lung surfactant protein D coiled-coil trimerisation CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGGCCTCGGTGACCGCGTGCTGCGACG
Internal bar code:TCAAGGCTCGATTCACCCTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:111
LEAP-Seq percent confirming:99.0385
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCAGGAGCAGGCATTT
Suggested primer 2:ACGTATCTTACCGTGCTGGG