Insertion junction: LMJ.RY0402.157435_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.157435
Chromosome:chromosome 17
Location:1212289
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g705000 FAP223,CDPK1 (1 of 1) PF00069//PF00168//PF13499//PF13833 - Protein kinase domain (Pkinase) // C2 domain (C2) // EF-hand domain pair (EF-hand_7) // EF-hand domain pair (EF-hand_8); Flagellar Associated Protein 223 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAGCCTAACGCAGCGCGGCTGCACCGTA
Internal bar code:CTGGGATAATTAAAGAGGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:902
LEAP-Seq percent confirming:93.819
LEAP-Seq n confirming:850
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACAGTCCGCATCTGTTC
Suggested primer 2:GACAATCAGCAGCTTGACCA