Insertion junction: LMJ.RY0402.157449_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.157449
Chromosome:chromosome 3
Location:1216644
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g149650 CCD1 related to carotenoid 9%252C10-9'%252C10' cleavage dioxygenase; (1 of 1) K11159 - carotenoid cleavage dioxygenase (K11159) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGCGTGTTTGTGCGTGTATACACTATG
Internal bar code:CTGGTTACGGCGCGTGTGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:93
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCATGCTCACCGTCACTC
Suggested primer 2:ACGAAGATGAGCAGGGAATG