Insertion junction: LMJ.RY0402.157495_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.157495
Chromosome:chromosome 13
Location:4786205
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g605100 PDE20 (1 of 1) PF00233//PF01590 - 3'5'-cyclic nucleotide phosphodiesterase (PDEase_I) // GAF domain (GAF); 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACAGCCTTGCGCTAACGTGCACCGTCCC
Internal bar code:GAGCCAGGAAATACTCCCAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1001
LEAP-Seq percent confirming:98.3307
LEAP-Seq n confirming:2474
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AACATCAAAGTTGGCCTTGG
Suggested primer 2:CATTGCTGTATGTTGGTGCC