Insertion junction: LMJ.RY0402.157654_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.157654
Chromosome:chromosome 4
Location:3023812
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g225100 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTAAGGGGATCTCTGGTACCCGGAGGC
Internal bar code:CGGGTCAACGTGCTTTGCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:147
LEAP-Seq percent confirming:98.8889
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGACTTTGACGAAGACGTGC
Suggested primer 2:AGTTGGTCCAGGTTGAGCAG