Insertion junction: LMJ.RY0402.157799_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.157799
Chromosome:chromosome 8
Location:2514210
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g372000 BAF3,CGLD6,CGLD11 chloroplast ATPase CF1 assembly factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGCGCCATCGGCAGCTTTCCCGCGCGT
Internal bar code:GGATGCGATCATCTTCCGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:867
LEAP-Seq percent confirming:98.0485
LEAP-Seq n confirming:1658
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCTAGTGAAGCACGAGG
Suggested primer 2:CTGCCTCCATACACATGCAC