Insertion junction: LMJ.RY0402.157856_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.157856
Chromosome:chromosome 14
Location:790920
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre14.g613050 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCGCCAAGGGCATCTATCTACTGGAAA
Internal bar code:GCATAGTTGAAACTCCTACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:274
LEAP-Seq percent confirming:99.375
LEAP-Seq n confirming:159
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCATGTGACGTTTTAGGG
Suggested primer 2:GGGTAGGGTAGGTGGAGAGC