Insertion junction: LMJ.RY0402.157919_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.157919
Chromosome:chromosome 16
Location:1130995
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g650050 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAAGGATTGAGGAGCGCAGGCGGATTA
Internal bar code:TTCCCCCTGTAGCCCAGGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:767
LEAP-Seq percent confirming:90.9495
LEAP-Seq n confirming:4703
LEAP-Seq n nonconfirming:468
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAAGGCGTGATCGGTGTT
Suggested primer 2:TGTGGCACTGAGAAGTGGAG