Insertion junction: LMJ.RY0402.158068_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.158068
Chromosome:chromosome 17
Location:3481104
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g724950 (1 of 1) PTHR16161:SF0 - TRANSCRIPTIONAL PROTEIN SWT1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTTGCATTTTTGGTTTGCTTCCAAGCCT
Internal bar code:AAGCGGCTCCAGGCCGCGCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:538
LEAP-Seq percent confirming:81.2881
LEAP-Seq n confirming:934
LEAP-Seq n nonconfirming:215
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGTCATTGGAGAGCAGA
Suggested primer 2:GTAACGCACAACTCCCACCT