Insertion junction: LMJ.RY0402.158079_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.158079
Chromosome:chromosome 16
Location:735768
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g691050 (1 of 1) PF08381 - Transcription factor regulating root and shoot growth via Pin3 (BRX) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGAGCGGCGGTGGCGCGCTGCTGCCGCG
Internal bar code:TGACCTGTCCTGGTCATGATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:28
LEAP-Seq percent confirming:61.3636
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCCTCCTCCACATCAGC
Suggested primer 2:TCAAGCAGCAGAACGACTTG