Insertion junction: LMJ.RY0402.158107_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.158107
Chromosome:chromosome 17
Location:6215154
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g742050 (1 of 18) IPR011051 - RmlC-like cupin domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGAGATTGCAGTGCAGCTTCGTCACGC
Internal bar code:CTTTGGAGTTTTACGCTTTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:167
LEAP-Seq percent confirming:97.5671
LEAP-Seq n confirming:3489
LEAP-Seq n nonconfirming:87
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACTTTATCGTCATCCCG
Suggested primer 2:TCATGAGCACGTCGATAAGC