Insertion junction: LMJ.RY0402.158249_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.158249
Chromosome:chromosome 8
Location:3588494
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g375801 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGGCCCTGCTCCGGCGTGAAGCGTGGC
Internal bar code:TATGTCGAACGCATGCATCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:553
LEAP-Seq percent confirming:86.4045
LEAP-Seq n confirming:769
LEAP-Seq n nonconfirming:121
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTTTCTTGAGGTAGGCG
Suggested primer 2:TTGGATGCAGTCTGTGAAGC