Insertion junction: LMJ.RY0402.158307_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.158307
Chromosome:chromosome 12
Location:8634310
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g546900 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCACCCGCCCAAGTCCACCACACGCA
Internal bar code:TCGGATGGGATTGGACAAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:355
LEAP-Seq percent confirming:79.8727
LEAP-Seq n confirming:1631
LEAP-Seq n nonconfirming:411
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGCTATGGGGTCCTGA
Suggested primer 2:CCCAACATGTCACACACACA