Insertion junction: LMJ.RY0402.158354_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.158354
Chromosome:chromosome 16
Location:5946247
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g677001 (1 of 1) PTHR31596:SF1 - T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTATCACCGTTGCCGATGAGAGATTAGA
Internal bar code:CAGTGTATGGGCTCAGGGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:40
LEAP-Seq percent confirming:78.8889
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGAAGTTCCAGGTTGCG
Suggested primer 2:CCTTACGGGATTGGTTCAGA