Insertion junction: LMJ.RY0402.158451_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.158451
Chromosome:chromosome 3
Location:4237167
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g174100 (1 of 1) IPR013122//IPR015928 - Polycystin cation channel, PKD1/PKD2 // Aconitase/3-isopropylmalate dehydratase, swivel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCCTGCTGGGCAGCTTCGTGCTGGTGCT
Internal bar code:GGGGGCATGCCGATTTATCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:228
LEAP-Seq percent confirming:42.7707
LEAP-Seq n confirming:2544
LEAP-Seq n nonconfirming:3404
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCCATGAAACGAAGGGT
Suggested primer 2:ACAGCTTCCTACAGGTGCGT