Insertion junction: LMJ.RY0402.158563_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.158563
Chromosome:chromosome 9
Location:2729319
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g389450 (1 of 1) IPR000104//IPR000504//IPR003613//IPR012677//IPR013083//IPR016024//IPR020683 - Antifreeze protein, type I // RNA recognition motif domain // U box domain // Nucleotide-binding alpha-beta plait domain // Zinc finger, RING/FYVE/PHD-type // Armadillo-type fold // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCAAGCAGGATCTAGTCGGGGCATGGC
Internal bar code:GATGCATGATCGAAACCTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:766
LEAP-Seq percent confirming:85.8038
LEAP-Seq n confirming:2055
LEAP-Seq n nonconfirming:340
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGCACATCCAGGAAAGG
Suggested primer 2:CTCAGACAGCTGCGAATCAC