Insertion junction: LMJ.RY0402.158677_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.158677
Chromosome:chromosome 5
Location:2783131
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g237050 CGLD27 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR34214:SF3 - GB|AAC18972.1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTCACCTCCTCGCCTCTTTCTTTCATC
Internal bar code:GCTTGTATCGGGGGCAATTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:390
LEAP-Seq percent confirming:99.4778
LEAP-Seq n confirming:381
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCAACCTCTCACAGCCC
Suggested primer 2:GTGGTCCTAGGCAGGATGAA