Insertion junction: LMJ.RY0402.158800_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.158800
Chromosome:chromosome 9
Location:5877262
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g402404 (1 of 1) IPR002048//IPR013761 - EF-hand domain // Sterile alpha motif/pointed domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGGCCAGCCGGTGCCGGGCCGCGTAGC
Internal bar code:TGGGGCGCGATGAAGAAGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:357
LEAP-Seq percent confirming:99.5782
LEAP-Seq n confirming:2833
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCTTCAATCACTCCAC
Suggested primer 2:CTAACTGATCGTGCCTGCAA