Insertion junction: LMJ.RY0402.158887_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.158887
Chromosome:chromosome 11
Location:1868710
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g468050 VIPP2 (1 of 2) K03969 - phage shock protein A (pspA); Vesicle inducing protein in plastids 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTTTCTTTCCTCGTGCCTCTCCCTTCCC
Internal bar code:AGTCGAAATATCGGAGCGACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:165
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGTGCGAAAGAGGTTAC
Suggested primer 2:ATACCGTGATGTGGGATGGT