Insertion junction: LMJ.RY0402.158887_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.158887
Chromosome:chromosome 11
Location:1868720
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g468050 VIPP2 (1 of 2) K03969 - phage shock protein A (pspA); Vesicle inducing protein in plastids 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAATCAAATGAGCCTCAGTCTTTCGGTT
Internal bar code:ACGTGGGTTCGATTAAAGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:380
LEAP-Seq percent confirming:99.6663
LEAP-Seq n confirming:2389
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCAAGACGGAGATTGAA
Suggested primer 2:ATACCGTGATGTGGGATGGT