Insertion junction: LMJ.RY0402.158953_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.158953
Chromosome:chromosome 9
Location:4765359
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g397290 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGATCCAAACTCCGGGACTTGACAGCT
Internal bar code:GAGGATCAGCCCGAAGATACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:907
LEAP-Seq percent confirming:98.4199
LEAP-Seq n confirming:1308
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AATACGGAAGAGGCTCAGCA
Suggested primer 2:ACTTTTGGGTGAGCCAGTGT