Insertion junction: LMJ.RY0402.159071_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.159071
Chromosome:chromosome 17
Location:4121117
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g729600 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGAGGAGCGTGCTTTCGTGCCGTAAGC
Internal bar code:AAGACTCAGCATACTCTGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:574
LEAP-Seq percent confirming:71.7086
LEAP-Seq n confirming:1939
LEAP-Seq n nonconfirming:765
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCAAAGTAGGTGGTAGG
Suggested primer 2:CCATCACCGTCAACACAGTC